AMTR_s00077p00180520 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00077.203

No description available


Gene families : OG0000463 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000463_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00077p00180520

Target Alias Description ECC score Gene Family Method Actions
AT1G64450 No alias Glycine-rich protein family 0.03 OrthoFinder output from all 47 species
Adi_g027937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23119 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04111 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08819.t1 Aspi01Gene08819 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58684.t1 Aspi01Gene58684 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s1215.g099840 No alias not classified & original description: CDS=1-450 0.03 OrthoFinder output from all 47 species
Ceric.03G013700.1 Ceric.03G013700 not classified & original description: pacid=50571296... 0.02 OrthoFinder output from all 47 species
Ceric.28G009400.1 Ceric.28G009400 not classified & original description: pacid=50570175... 0.04 OrthoFinder output from all 47 species
Dac_g08901 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g09249 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g27007 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g48973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026977001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_17490 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g53470.1 LOC_Os01g53470 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os05g40400.1 LOC_Os05g40400 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g32970.1 LOC_Os06g32970 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g15242 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g30333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g36133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g53705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g06270.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp7g02660.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g13106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g16439 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g18245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g04336 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g28507 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c9_12490V3.1 Pp3c9_12490 Glycine-rich protein family 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006134 No alias not classified & original description: CDS=1-957 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020255 No alias not classified & original description: CDS=1-648 0.05 OrthoFinder output from all 47 species
Solyc08g008150.1.1 Solyc08g008150 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g10584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016378_P001 Zm00001e016378 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e019888_P001 Zm00001e019888 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e027143_P001 Zm00001e027143 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004864 LEA_2 86 156
No external refs found!