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  5. AMTR_s00077p00161250

AMTR_s00077p00161250 (RPT2,...)


Aliases : RPT2, evm_27.TU.AmTr_v1.0_scaffold00077.167

Description : Root phototropism protein 2 OS=Arabidopsis thaliana


Gene families : OG0017031 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0017031_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00077p00161250

Target Alias Description ECC score Gene Family Method Actions
AT2G30520 RPT2 Phototropic-responsive NPH3 family protein 0.04 OrthoFinder output from all 47 species
LOC_Os11g02610.1 RPT2, LOC_Os11g02610 Root phototropism protein 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os12g02530.2 RPT2, LOC_Os12g02530 Root phototropism protein 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc07g043130.3.1 RPT2, Solyc07g043130 Root phototropism protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e009259_P001 RPT2, Zm00001e009259 Root phototropism protein 2 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e039271_P001 RPT2, Zm00001e039271 Root phototropism protein 2 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 182 434
No external refs found!