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  5. AMTR_s00076p00089510

AMTR_s00076p00089510 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00076.23

No description available


Gene families : OG0001602 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001602_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00076p00089510

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g56570.1 LOC_Os04g56570 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10435010g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g28834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006611_P002 Zm00001e006611 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e020167_P001 Zm00001e020167 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR006121 HMA_dom 1 51
No external refs found!