AMTR_s00074p00193280 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00074.117

Description : Disease resistance protein RPM1 OS=Arabidopsis thaliana

Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00074p00193280

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00044p00196010	evm_27.TU.AmTr_v1...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
AMTR_s00088p00152700	evm_27.TU.AmTr_v1...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
AMTR_s00148p00037160	ZAR1,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
AT1G10920	LOV1	NB-ARC domain-containing disease resistance protein	0.03	OrthoFinder output from all 47 species
AT1G50180	No alias	NB-ARC domain-containing disease resistance protein	0.05	OrthoFinder output from all 47 species
AT1G58602	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.04	OrthoFinder output from all 47 species
AT3G07040	RPM1, RPS3	NB-ARC domain-containing disease resistance protein	0.04	OrthoFinder output from all 47 species
AT3G46530	RPP13	NB-ARC domain-containing disease resistance protein	0.05	OrthoFinder output from all 47 species
AT3G50950	ZAR1	HOPZ-ACTIVATED RESISTANCE 1	0.03	OrthoFinder output from all 47 species
GSVIVT01012169001	RPM1, RPS3	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
LOC_Os11g12050.2	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR025875	Leu-rich_rpt_4	363	400
IPR002182	NB-ARC	17	220

External Links

No external refs found!