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  5. AMTR_s00074p00172630

AMTR_s00074p00172630 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00074.86

Description : Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana


Gene families : OG0000596 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000596_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00074p00172630

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00262490 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00099p00108370 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g64320,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 5 36
IPR002885 Pentatricopeptide_repeat 41 71
IPR002885 Pentatricopeptide_repeat 78 127
No external refs found!