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  5. AMTR_s00073p00116690

AMTR_s00073p00116690 (FBW2,...)


Aliases : FBW2, evm_27.TU.AmTr_v1.0_scaffold00073.29

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.FBX component


Gene families : OG0000527 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000527_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00073p00116690

Target Alias Description ECC score Gene Family Method Actions
Adi_g060455 No alias substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Aev_g01909 FBW2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g02182 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene29430.t1 FBW2, Aspi01Gene29430 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Cba_g04397 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29845 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g13878 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Dde_g12383 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.04 OrthoFinder output from all 47 species
LOC_Os02g21240.1 LOC_Os02g21240 Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Len_g01534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04646 SKIP1 substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.04 OrthoFinder output from all 47 species
Lfl_g05249 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g06641 No alias substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Pir_g12415 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Pnu_g16969 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01116 SKIP1 substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0158.g023773 FBW2 not classified & original description: CDS=937-2064 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0193.g025375 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sam_g11159 No alias substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sam_g13010 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species
Smo85659 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Solyc08g013820.3.1 Solyc08g013820 Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Spa_g02610 SKIP1 substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.03 OrthoFinder output from all 47 species
Spa_g09044 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Spa_g15037 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g00863 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquiTin ligase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
MF GO:0048037 obsolete cofactor binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!