1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00071p00140730

AMTR_s00071p00140730 (PHB1, ATPHB1,...)


Aliases : PHB1, ATPHB1, evm_27.TU.AmTr_v1.0_scaffold00071.126

Description : Prohibitin-1, mitochondrial OS=Arabidopsis thaliana


Gene families : OG0002789 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002789_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00071p00140730
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Aev_g00787 PHB1, ATPHB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01193 PHB1, ATPHB1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g00373 PHB1, ATPHB1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene50091.t1 PHB1, ATPHB1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cre02.g088000 PHB1, ATPHB1 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Dac_g03655 PHB1, ATPHB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os07g15880.1 PHB2, ATPHB2,... Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g07864 PHB1, ATPHB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_9438062g0010 PHB1, ATPHB1 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Msp_g01082 PHB1, ATPHB1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g40562 PHB1, ATPHB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12045 PHB1, ATPHB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c25_1160V3.1 PHB1, ATPHB1, Pp3c25_1160 prohibitin 6 0.05 OrthoFinder output from all 47 species
Sam_g17556 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g008140.3.1 PHB1, ATPHB1,... Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Spa_g12157 PHB1, ATPHB1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g25323 PHB1, ATPHB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009600_P001 PHB2, ATPHB2,... Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR001107 Band_7 33 194
No external refs found!