AMTR_s00071p00011090 (RPL2.1,...)

Aliases : RPL2.1, evm_27.TU.AmTr_v1.0_scaffold00071.1

Description : 50S ribosomal protein L2, chloroplastic OS=Amborella trichopoda

Gene families : OG0002194 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002194_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00071p00011090

Target	Alias	Description	ECC score	Gene Family Method
Aop_g61267	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Ceric.23G029300.1	Ceric.23G029300	not classified & original description: pacid=50611505...	0.04	OrthoFinder output from all 47 species
Ceric.25G023800.1	Ceric.25G023800	not classified & original description: pacid=50593099...	0.04	OrthoFinder output from all 47 species
Cre07.g348850	RPL2.1	50S ribosomal protein L2, chloroplastic OS=Chara vulgaris	0.01	OrthoFinder output from all 47 species
Sam_g03873	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Solyc00g500036.1.1	RPL2.1, Solyc00g500036	50S ribosomal protein L2, chloroplastic OS=Nicotiana...	0.03	OrthoFinder output from all 47 species
Solyc00g500080.1.1	RPL2.1, Solyc00g500080	50S ribosomal protein L2, chloroplastic OS=Nicotiana...	0.03	OrthoFinder output from all 47 species
Solyc00g500298.1.1	RPL2.1, Solyc00g500298	50S ribosomal protein L2, chloroplastic OS=Nicotiana...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	IEA	Interproscan
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR022669	Ribosomal_L2_C	1	117

External Links

No external refs found!

AMTR_s00071p00011090 (RPL2.1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation