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  5. AMTR_s00070p00195850

AMTR_s00070p00195850 (KOM,...)


Aliases : KOM, evm_27.TU.AmTr_v1.0_scaffold00070.130

Description : Protein degradation.peptidase families.serine-type peptidase activities.Rhomboid protease


Gene families : OG0000668 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000668_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00070p00195850
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AT1G63120 RBL2, ATRBL2 RHOMBOID-like 2 0.05 OrthoFinder output from all 47 species
Ala_g12857 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05510 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47601 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05092 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.16G010900.1 RBL1, ATRBL1,... protease *(RBL) & original description: pacid=50588740... 0.04 OrthoFinder output from all 47 species
Dac_g04619 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20994 RBL1, ATRBL1 protease *(RBL) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g42772 RBL1, ATRBL1 protease *(RBL) & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g01404 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06776 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25784 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008957001 KOM Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01017301001 RBL1, ATRBL1 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
GSVIVT01019824001 RBL2, ATRBL2 Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
Gb_20562 RBL1, ATRBL1 protease (RBL) 0.03 OrthoFinder output from all 47 species
LOC_Os08g43320.1 RBL2, ATRBL2,... protease (RBL) 0.06 OrthoFinder output from all 47 species
LOC_Os09g35730.1 RBL3, ATRBL3,... protease (RBL) 0.03 OrthoFinder output from all 47 species
Lfl_g05981 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g00504 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10257 RBL1, ATRBL1 protease *(RBL) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010272 RBL1, ATRBL1 protease *(RBL) & original description: CDS=374-1408 0.03 OrthoFinder output from all 47 species
Sam_g14383 No alias protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g57345 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14488 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024265_P001 RBL2, ATRBL2,... protease (RBL) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 122 263
No external refs found!