AMTR_s00069p00125390 (crr1,...)

Aliases : crr1, evm_27.TU.AmTr_v1.0_scaffold00069.85

Description : Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and stabilization.protein factor CRR1

Gene families : OG0008182 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008182_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00069p00125390

Target	Alias	Description	ECC score	Gene Family Method
AT5G52100	crr1	Dihydrodipicolinate reductase, bacterial/plant	0.05	OrthoFinder output from all 47 species
Azfi_s0110.g045455	crr1	assembly factor CRR1 involved in NDH complex assembly &...	0.02	OrthoFinder output from all 47 species
Cba_g25348	crr1	assembly factor CRR1 involved in NDH complex assembly &...	0.03	OrthoFinder output from all 47 species
Dde_g51105	crr1	assembly factor CRR1 involved in NDH complex assembly &...	0.02	OrthoFinder output from all 47 species
GSVIVT01010618001	crr1	Photosynthesis.photophosphorylation.chlororespiration.NAD...	0.1	OrthoFinder output from all 47 species
LOC_Os03g02690.1	crr1, LOC_Os03g02690	assembly factor CRR1 involved in NDH complex assembly	0.04	OrthoFinder output from all 47 species
Lfl_g37418	crr1	assembly factor CRR1 involved in NDH complex assembly &...	0.04	OrthoFinder output from all 47 species
Ppi_g54395	crr1	assembly factor CRR1 involved in NDH complex assembly &...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012493	crr1	assembly factor CRR1 involved in NDH complex assembly &...	0.04	OrthoFinder output from all 47 species
Solyc03g026210.4.1	crr1, Solyc03g026210	assembly factor CRR1 involved in NDH complex assembly	0.07	OrthoFinder output from all 47 species
Tin_g09695	crr1	assembly factor CRR1 involved in NDH complex assembly &...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006553	lysine metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	amino acid biosynthetic process	None	Extended
MF	GO:0008839	4-hydroxy-tetrahydrodipicolinate reductase	IEA	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009066	aspartate family amino acid metabolic process	None	Extended
BP	GO:0009067	aspartate family amino acid biosynthetic process	None	Extended
BP	GO:0009085	lysine biosynthetic process	None	Extended
BP	GO:0009089	lysine biosynthetic process via diaminopimelate	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	None	Extended
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043648	dicarboxylic acid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0046451	diaminopimelate metabolic process	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008080	N-acetyltransferase activity	IEP	HCCA
CC	GO:0009507	chloroplast	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009536	plastid	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
MF	GO:0016407	acetyltransferase activity	IEP	HCCA
MF	GO:0016410	N-acyltransferase activity	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
CC	GO:0019898	extrinsic component of membrane	IEP	HCCA
MF	GO:0046422	violaxanthin de-epoxidase activity	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022663	DapB_C	166	296
IPR000846	DapB_N	32	159

External Links

No external refs found!

AMTR_s00069p00125390 (crr1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation