AMTR_s00069p00115850 (PP2-A15, AtPP2-A15,...)


Aliases : PP2-A15, AtPP2-A15, evm_27.TU.AmTr_v1.0_scaffold00069.78

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.FBX component


Gene families : OG0000279 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000279_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00069p00115850

Target Alias Description ECC score Gene Family Method Actions
AT1G56250 PP2-B14, AtPP2-B14 phloem protein 2-B14 0.03 OrthoFinder output from all 47 species
AT2G02230 AtPP2-B1, PP2-B1 phloem protein 2-B1 0.04 OrthoFinder output from all 47 species
AT3G61060 AtPP2-A13, PP2-A13 phloem protein 2-A13 0.04 OrthoFinder output from all 47 species
Aob_g18734 AtPP2-B1, PP2-B1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g29919 PP2-A1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene55189.t2 ATPP2-A4,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g08679 AtPP2-B1, PP2-B1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003900001 MEE66 F-box protein At2g02240 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os04g48270.3 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.05 OrthoFinder output from all 47 species
MA_203210g0010 PP2-B15, AtPP2-B15 F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g08804 AtPP2-B8, PP2-B8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25366 AtPP2-B12, PP2-B12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g085490.3.1 PP2-A15,... component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Zm00001e023618_P002 ATPP2-B11,... Putative F-box protein PP2-B12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR025886 PP2-like 114 287
No external refs found!