Aliases : PP2-A15, AtPP2-A15, evm_27.TU.AmTr_v1.0_scaffold00069.78
Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.FBX component
Gene families : OG0000279 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000279_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G56250 | PP2-B14, AtPP2-B14 | phloem protein 2-B14 | 0.03 | OrthoFinder output from all 47 species | |
AT2G02230 | AtPP2-B1, PP2-B1 | phloem protein 2-B1 | 0.04 | OrthoFinder output from all 47 species | |
AT3G61060 | AtPP2-A13, PP2-A13 | phloem protein 2-A13 | 0.04 | OrthoFinder output from all 47 species | |
Aob_g18734 | AtPP2-B1, PP2-B1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g29919 | PP2-A1,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene55189.t2 | ATPP2-A4,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dac_g08679 | AtPP2-B1, PP2-B1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01003900001 | MEE66 | F-box protein At2g02240 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os04g48270.3 | AtPP2-A13,... | component FBX of SCF E3 ubiquitin ligase complex | 0.05 | OrthoFinder output from all 47 species | |
MA_203210g0010 | PP2-B15, AtPP2-B15 | F-box protein PP2-B15 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
Msp_g08804 | AtPP2-B8, PP2-B8 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g25366 | AtPP2-B12, PP2-B12 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc10g085490.3.1 | PP2-A15,... | component FBX of SCF E3 ubiquitin ligase complex | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e023618_P002 | ATPP2-B11,... | Putative F-box protein PP2-B12 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
MF | GO:0005525 | GTP binding | IEP | HCCA |
MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR025886 | PP2-like | 114 | 287 |
No external refs found! |