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  5. AMTR_s00069p00114060

AMTR_s00069p00114060 (BB2, BB,...)


Aliases : BB2, BB, evm_27.TU.AmTr_v1.0_scaffold00069.77

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0000935 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000935_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00069p00114060
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AT5G52155 No alias No description available 0.02 OrthoFinder output from all 47 species
Ala_g14235 BB2, BB E3 ubiquitin ligase *(EOD1) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10739 BB2, BB E3 ubiquitin ligase *(EOD1) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g51397 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.29G019500.1 Ceric.29G019500 RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dac_g02128 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dde_g08756 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
GSVIVT01020798001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Gb_32928 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_33701 BB2, BB E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os09g35690.1 BB2, BB, LOC_Os09g35690 E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g02751 No alias E3 ubiquitin ligase *(EOD1) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g08546 BB2, BB E3 ubiquitin ligase *(EOD1) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g087060.4.1 BB2, BB, Solyc01g087060 E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e036646_P001 BB2, BB, Zm00001e036646 E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 236 272
No external refs found!