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Aliases : evm_27.TU.AmTr_v1.0_scaffold00069.52
Description : Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana
Gene families : OG0000190 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000190_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00069p00082650 | |
| Cluster | HCCA: Cluster_25 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00085p00054430 | evm_27.TU.AmTr_v1... | Short-chain dehydrogenase TIC 32, chloroplastic... | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g077005 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g104526 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g37903 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g25405 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g04800 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g23934 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g44591 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g44592 | No alias | component *(Tic32) of inner envelope TIC translocation... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g63765 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g01098 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g23987 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g05416 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene24658.t1 | Aspi01Gene24658 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene33954.t1 | Aspi01Gene33954 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene52075.t1 | Aspi01Gene52075 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene57782.t1 | Aspi01Gene57782 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g03034 | No alias | component *(Tic32) of inner envelope TIC translocation... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.06G025800.1 | Ceric.06G025800 | not classified & original description: pacid=50620122... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.32G064100.1 | Ceric.32G064100 | not classified & original description: pacid=50598429... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g36227 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g40962 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g46056 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g50051 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g07148 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g12374 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01019612001 | No alias | Short-chain dehydrogenase TIC 32, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01025521001 | No alias | Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01028900001 | No alias | Protein translocation.chloroplast.inner envelope TIC... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os06g03830.1 | LOC_Os06g03830 | Short-chain dehydrogenase TIC 32, chloroplastic... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g04488 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06923 | No alias | component *(Tic32) of inner envelope TIC translocation... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g17256 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g12126 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g40152 | No alias | component *(Tic32) of inner envelope TIC translocation... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g40153 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g30389 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g37039 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g37040 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g22836 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g59979 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g06702 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g15633 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g46897 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g30120 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e016903_P001 | Zm00001e016903 | Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e037925_P002 | Zm00001e037925 | Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0008152 | metabolic process | IEA | Interproscan |
| MF | GO:0016491 | oxidoreductase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004857 | enzyme inhibitor activity | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| CC | GO:0005618 | cell wall | IEP | HCCA |
| MF | GO:0008146 | sulfotransferase activity | IEP | HCCA |
| MF | GO:0016706 | 2-oxoglutarate-dependent dioxygenase activity | IEP | HCCA |
| MF | GO:0016782 | transferase activity, transferring sulphur-containing groups | IEP | HCCA |
| MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
| CC | GO:0030312 | external encapsulating structure | IEP | HCCA |
| MF | GO:0030599 | pectinesterase activity | IEP | HCCA |
| BP | GO:0042545 | cell wall modification | IEP | HCCA |
| BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
| BP | GO:0071555 | cell wall organization | IEP | HCCA |
| MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
| MF | GO:0140678 | molecular function inhibitor activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |