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  5. AMTR_s00068p00185430

AMTR_s00068p00185430 (UBC24, PHO2, ATUBC24,...)


Aliases : UBC24, PHO2, ATUBC24, evm_27.TU.AmTr_v1.0_scaffold00068.145

Description : Probable ubiquitin-conjugating enzyme E2 24 OS=Arabidopsis thaliana


Gene families : OG0001231 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001231_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00068p00185430
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00015p00258340 PFU2, UBC23,... Nutrient uptake.phosphorus assimilation.phosphate... 0.03 OrthoFinder output from all 47 species
AT2G33770 UBC24, PHO2, ATUBC24 phosphate 2 0.03 OrthoFinder output from all 47 species
Aop_g13260 UBC24, PHO2, ATUBC24 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19557 PFU2, UBC23 E2 ubiquitin-conjugating protein *(PHO2) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003615 PFU2, UBC23 E2 ubiquitin-conjugating protein *(PHO2) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e016384_P002 Zm00001e016384 Probable ubiquitin-conjugating enzyme E2 26... 0.02 OrthoFinder output from all 47 species
Zm00001e026121_P001 Zm00001e026121 Probable ubiquitin-conjugating enzyme E2 26... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016881 acid-amino acid ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 90 207
No external refs found!