Aliases : ATHDA19, HDA1, HD1, ATHD1, HDA19, RPD3A, evm_27.TU.AmTr_v1.0_scaffold00068.89
Description : Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase
Gene families : OG0000827 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000827_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aev_g01412 | ATHDA19, HDA1,... | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.03 | OrthoFinder output from all 47 species | |
Als_g16026 | ATHDA19, HDA1,... | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene06846.t1 | ATHDA19, HDA1,... | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.25G049900.1 | ATHDA19, HDA1,... | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g12683 | ATHDA19, HDA1,... | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.04 | OrthoFinder output from all 47 species | |
Gb_10850 | HDA6, RTS1,... | class-I histone deacetylase. deacetylase component HDA19... | 0.03 | OrthoFinder output from all 47 species | |
Gb_12025 | ATHDA19, HDA1,... | class-I histone deacetylase. deacetylase component HDA19... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os08g25570.1 | HDA6, RTS1,... | class-I histone deacetylase | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g05599 | ATHDA19, HDA1,... | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g10755 | ATHDA19, HDA1,... | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g03843 | ATHDA19, HDA1,... | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e008229_P001 | HDA09, HDA9,... | class-I histone deacetylase. component HDA9 of HDA9-PWR... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
MF | GO:0004176 | ATP-dependent peptidase activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005741 | mitochondrial outer membrane | IEP | HCCA |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006479 | protein methylation | IEP | HCCA |
BP | GO:0008037 | cell recognition | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
BP | GO:0008213 | protein alkylation | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
CC | GO:0019867 | outer membrane | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
CC | GO:0031090 | organelle membrane | IEP | HCCA |
CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
CC | GO:0031968 | organelle outer membrane | IEP | HCCA |
BP | GO:0032259 | methylation | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0048544 | recognition of pollen | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR023801 | His_deacetylse_dom | 35 | 329 |
No external refs found! |