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  5. AMTR_s00068p00099460

AMTR_s00068p00099460 (ATMYB5, MYB5,...)


Aliases : ATMYB5, MYB5, evm_27.TU.AmTr_v1.0_scaffold00068.49

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00068p00099460
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene63727.t1 ATMIXTA, MYB16,... MYB class-R2R3 subgroup-8 transcription factor &... 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001484 AtMYB85, MYB85 not classified & original description: CDS=1-468 0.06 OrthoFinder output from all 47 species
Lfl_g17349 ATMYB4, MYB4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_121533g0010 MYB84, RAX3, ATMYB84 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Nbi_g06155 AtMYB50, MYB50 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37504 No alias transcriptional regulator *(MS188) & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e007337_P001 DUO1, Zm00001e007337 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e010251_P001 ATMYB4, MYB4,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 93 133
IPR001005 SANT/Myb 35 82
No external refs found!