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  5. AMTR_s00068p00097220

AMTR_s00068p00097220 (ATMYB5, MYB5,...)


Aliases : ATMYB5, MYB5, evm_27.TU.AmTr_v1.0_scaffold00068.48

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00068p00097220
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00224470 MYB3, ATMYB3,... RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
AMTR_s00049p00074250 AtMYB20, MYB20,... RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
AMTR_s00107p00028750 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00133p00075670 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00145p00098450 ATMYB59-1,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AMTR_s01267p00006490 ATMYB48-1,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AT3G13540 ATMYB5, MYB5 myb domain protein 5 0.02 OrthoFinder output from all 47 species
AT5G07700 MYB76, AtMYB76 myb domain protein 76 0.03 OrthoFinder output from all 47 species
AT5G14340 AtMYB40, MYB40 myb domain protein 40 0.02 OrthoFinder output from all 47 species
AT5G35550 MYB123,... Duplicated homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G61420 PMG1, AtMYB28,... myb domain protein 28 0.04 OrthoFinder output from all 47 species
Aev_g08312 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.02 OrthoFinder output from all 47 species
Ala_g11169 ATMYB46, MYB46 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27617 ATMYB61, MYB61 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20969 ATY53, ATMYB67, MYB67 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene54012.t1 MYB86, ATMYB86,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14180 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.03 OrthoFinder output from all 47 species
Dac_g14836 ATMYB61, MYB61 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g40103 MYB86, ATMYB86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g26219 AtMYB50, MYB50 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g42464 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g50039 AtMYB50, MYB50 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g47339 ATMYB4, MYB4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009032001 AtMYB93, MYB93 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01012447001 MYB33, ATMYB33 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01013126001 AtMYB107, MYB107 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01024353001 AtMYB107, MYB107 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01035177001 AtMYB93, MYB93 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Gb_00379 ATMIXTA, MYB16, ATMYB16 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Gb_23244 AtMYB107, MYB107 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Gb_34882 MYB68, ATMYB68 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os01g07450.1 MYB86, ATMYB86,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os03g19120.1 ATMYB12, PFG1,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os06g10350.1 MYB7, ATY49,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os07g44090.3 AtMYB50, MYB50,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os12g03150.1 MYB60, AtMYB60,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Len_g50500 AtMYB83, MYB83 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_66255g0010 ATMIXTA, MYB16, ATMYB16 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Mp1g09420.1 ATMIXTA, MYB16, ATMYB16 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Mp6g04830.1 MYB84, RAX3, ATMYB84 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Pir_g47441 ATMYB5, MYB5 MYB class-R2R3 transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08138 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g33821 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g079280.3.1 ATMYB102, ATM4,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Solyc02g089190.2.1 MYB121,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc03g093890.3.1 ATMYB14, MYB14,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc04g014470.3.1 AtMYB20, MYB20,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc07g054840.4.1 ATMYB102, ATM4,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc08g076700.1.1 MYB9, AtMYB9,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc08g076710.3.1 MYB9, AtMYB9,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc09g090790.3.1 MYB305, ATMYB71,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc10g081490.2.1 MYB60, AtMYB60,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc12g049300.2.1 MYB3, ATMYB3,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Spa_g38387 AtMYB20, MYB20 MYB class-R2R3 transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001803_P001 AtMYB50, MYB50,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e004164_P002 AtMYB20, MYB20,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e007904_P001 ATMIXTA, MYB16,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e016072_P001 MYB36, AtMYB36,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e028653_P001 ATMYB4, MYB4,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e034118_P001 ATMYB94,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e041239_P001 ATMYB15, ATY19,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 93 133
IPR001005 SANT/Myb 35 82
No external refs found!