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  5. AMTR_s00067p00167320

AMTR_s00067p00167320 (LUH,...)


Aliases : LUH, evm_27.TU.AmTr_v1.0_scaffold00067.172

Description : RNA biosynthesis.transcriptional repression.LUG transcriptional co-repressor


Gene families : OG0000790 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000790_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00067p00167320
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Ala_g09330 LUG, RON2 component *(LUG/LUH) of transcriptional co-repressor... 0.02 OrthoFinder output from all 47 species
Als_g61871 LUG, RON2 component *(LUG/LUH) of transcriptional co-repressor... 0.03 OrthoFinder output from all 47 species
Ehy_g08626 LUG, RON2 component *(LUG/LUH) of transcriptional co-repressor... 0.03 OrthoFinder output from all 47 species
GSVIVT01035790001 LUG, RON2 RNA biosynthesis.transcriptional repression.LUG... 0.03 OrthoFinder output from all 47 species
Len_g06743 LUG, RON2 component *(LUG/LUH) of transcriptional co-repressor... 0.03 OrthoFinder output from all 47 species
MA_20165g0030 LUG, RON2 transcriptional co-repressor (LUG) 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017924 LUG, RON2 component *(LUG/LUH) of transcriptional co-repressor... 0.03 OrthoFinder output from all 47 species
Sam_g26900 No alias component *(LUG/LUH) of transcriptional co-repressor... 0.02 OrthoFinder output from all 47 species
Spa_g27899 LUG, RON2 component *(LUG/LUH) of transcriptional co-repressor... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 638 675
IPR001680 WD40_repeat 558 589
IPR001680 WD40_repeat 807 839
IPR001680 WD40_repeat 598 631
IPR001680 WD40_repeat 721 755
No external refs found!