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  5. AMTR_s00067p00074620

AMTR_s00067p00074620 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00067.50

Description : Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.XPO4 transport karyopherin


Gene families : OG0004951 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004951_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00067p00074620
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Als_g12362 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01023507001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.04 OrthoFinder output from all 47 species
Len_g12155 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.02 OrthoFinder output from all 47 species
MA_10429031g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_16344g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_164551g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g13581 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!