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  5. AMTR_s00067p00033540

AMTR_s00067p00033540 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00067.17

Description : Patellin-4 OS=Arabidopsis thaliana


Gene families : OG0000756 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000756_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00067p00033540

Target Alias Description ECC score Gene Family Method Actions
Adi_g036762 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g039396 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g112513 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03709 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27095 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0212.g058185 No alias not classified & original description: CDS=1-1785 0.02 OrthoFinder output from all 47 species
Dac_g15651 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_20479 No alias Patellin-6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp4g06280.1 No alias Patellin-6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g08891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13952 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20603 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g025230.4.1 Solyc09g025230 Patellin-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000103 sulfate assimilation IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004020 adenylylsulfate kinase activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006020 inositol metabolic process IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006909 phagocytosis IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0019310 inositol catabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044275 cellular carbohydrate catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
MF GO:0050113 inositol oxygenase activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011074 CRAL/TRIO_N_dom 131 158
IPR001251 CRAL-TRIO_dom 184 343
No external refs found!