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  5. AMTR_s00066p00202260

AMTR_s00066p00202260 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00066.273

Description : Cell cycle.organelle machineries.DNA replication.RNA primer removal.mitochondrial exonuclease


Gene families : OG0005289 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005289_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00066p00202260

Target Alias Description ECC score Gene Family Method Actions
Ala_g20181 No alias mitochondrial RNA exonuclease & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g22618 No alias mitochondrial RNA exonuclease & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01038136001 No alias Cell cycle.organelle machineries.DNA replication.RNA... 0.03 OrthoFinder output from all 47 species
MA_449467g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0008409 5'-3' exonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000015 phosphopyruvate hydratase complex IEP HCCA
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0004634 phosphopyruvate hydratase activity IEP HCCA
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0008373 sialyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
MF GO:0019238 cyclohydrolase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR020045 DNA_polI_H3TH 368 451
IPR020046 5-3_exonucl_a-hlix_arch_N 193 365
No external refs found!