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  5. AMTR_s00066p00186200

AMTR_s00066p00186200 (AtCRT3, EBS2, CRT3,...)


Aliases : AtCRT3, EBS2, CRT3, PSL1, evm_27.TU.AmTr_v1.0_scaffold00066.235

Description : Protein modification.protein folding and quality control.N-glycan-dependent machinery.CNX-CRT cycle.CRT lectin chaperone


Gene families : OG0000812 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000812_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00066p00186200

Target Alias Description ECC score Gene Family Method Actions
Ceric.13G021500.1 AtCRT1a, CRT1a,... ER luminal lectin chaperone *(CRT) & original... 0.03 OrthoFinder output from all 47 species
Gb_37391 AtCRT3, EBS2, CRT3, PSL1 lectin chaperone (CRT) 0.07 OrthoFinder output from all 47 species
LOC_Os03g61670.1 AtCRT1a, CRT1a,... lectin chaperone (CRT) 0.04 OrthoFinder output from all 47 species
Ppi_g08966 AtCRT3, EBS2, CRT3, PSL1 ER luminal lectin chaperone *(CRT) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60905 AtCRT3, EBS2, CRT3, PSL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26252 No alias ER luminal lectin chaperone *(CRT) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g048900.3.1 AtCRT3, EBS2,... lectin chaperone (CRT) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0005783 endoplasmic reticulum IEA Interproscan
BP GO:0006457 protein folding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0016020 membrane IEP HCCA
InterPro domains Description Start Stop
IPR001580 Calret/calnex 10 304
No external refs found!