Aliases : ATPRFB, HCF109, evm_27.TU.AmTr_v1.0_scaffold00066.232
Description : Protein biosynthesis.organelle translation machineries.translation termination.PrfB-type peptide chain release factor
Gene families : OG0002101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002101_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G57190 | No alias | peptide chain release factor, putative | 0.03 | OrthoFinder output from all 47 species | |
AT5G36170 | ATPRFB, HCF109 | high chlorophyll fluorescent 109 | 0.06 | OrthoFinder output from all 47 species | |
Adi_g040965 | ATPRFB, HCF109 | translation peptide chain release factor *(PrfB) &... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g01893 | ATPRFB, HCF109 | translation peptide chain release factor *(PrfB) &... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g08393 | No alias | translation peptide chain release factor *(PrfB) &... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene23943.t1 | ATPRFB, HCF109,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0252.g060375 | ATPRFB, HCF109 | translation peptide chain release factor *(PrfB) &... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g23243 | ATPRFB, HCF109 | translation peptide chain release factor *(PrfB) &... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.36G013000.1 | ATPRFB, HCF109,... | translation peptide chain release factor *(PrfB) &... | 0.04 | OrthoFinder output from all 47 species | |
Cre01.g010864 | ATPRFB, HCF109 | Protein biosynthesis.organelle translation... | 0.07 | OrthoFinder output from all 47 species | |
Dcu_g09191 | ATPRFB, HCF109 | translation peptide chain release factor *(PrfB) &... | 0.07 | OrthoFinder output from all 47 species | |
Ehy_g09038 | ATPRFB, HCF109 | translation peptide chain release factor *(PrfB) &... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01033556001 | No alias | Protein biosynthesis.organelle translation... | 0.03 | OrthoFinder output from all 47 species | |
Gb_27626 | ATPRFB, HCF109 | PrfB-type translation peptide chain release factor | 0.01 | OrthoFinder output from all 47 species | |
Len_g16720 | ATPRFB, HCF109 | translation peptide chain release factor *(PrfB) &... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g12599 | ATPRFB, HCF109 | translation peptide chain release factor *(PrfB) &... | 0.04 | OrthoFinder output from all 47 species | |
MA_10437191g0010 | ATPRFB, HCF109 | PrfB-type translation peptide chain release factor | 0.06 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0004.g002336 | ATPRFB, HCF109 | translation peptide chain release factor *(PrfB) &... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g51819 | No alias | translation peptide chain release factor *(PrfB) &... | 0.05 | OrthoFinder output from all 47 species | |
Smo430253 | ATPRFB, HCF109 | Protein biosynthesis.organelle translation... | 0.02 | OrthoFinder output from all 47 species | |
Solyc04g025290.4.1 | ATPRFB, HCF109,... | PrfB-type translation peptide chain release factor | 0.09 | OrthoFinder output from all 47 species | |
Spa_g09555 | ATPRFB, HCF109 | translation peptide chain release factor *(PrfB) &... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e031540_P002 | Zm00001e031540 | PrfB-type translation peptide chain release factor | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003747 | translation release factor activity | IEA | Interproscan |
CC | GO:0005737 | cytoplasm | IEA | Interproscan |
BP | GO:0006415 | translational termination | IEA | Interproscan |
MF | GO:0016149 | translation release factor activity, codon specific | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0005525 | GTP binding | IEP | HCCA |
BP | GO:0006066 | alcohol metabolic process | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006766 | vitamin metabolic process | IEP | HCCA |
BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | HCCA |
BP | GO:0006772 | thiamine metabolic process | IEP | HCCA |
BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
BP | GO:0009110 | vitamin biosynthetic process | IEP | HCCA |
BP | GO:0009228 | thiamine biosynthetic process | IEP | HCCA |
CC | GO:0009507 | chloroplast | IEP | HCCA |
CC | GO:0009536 | plastid | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
BP | GO:0034308 | primary alcohol metabolic process | IEP | HCCA |
BP | GO:0034309 | primary alcohol biosynthetic process | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | HCCA |
BP | GO:0042723 | thiamine-containing compound metabolic process | IEP | HCCA |
BP | GO:0042724 | thiamine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
BP | GO:0044272 | sulfur compound biosynthetic process | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
BP | GO:0046165 | alcohol biosynthetic process | IEP | HCCA |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
MF | GO:0051540 | metal cluster binding | IEP | HCCA |
BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | HCCA |
BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | HCCA |
No external refs found! |