Zm00001d023859 (GRMZM2G300965)


Aliases : GRMZM2G300965

Description : 20.1.1 stress.biotic.respiratory burst NADPH-oxidase AtrbohB plays a role in seed after-ripening. Major producer of superoxide in germinating seeds. AtrbohB pre-mRNA is alternatively spliced in seeds in a hormonally and developmentally regulated manner. ABA caused accumulation of AtrbohB-fl mRNA and prevented prevented AtrbohB-a mRNA expression in fresh seeds. respiratory burst oxidase homolog B (RBOHB)


Gene families : OG_01_0000184 (Gene family) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d023859
Cluster HCCA cluster: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AT5G60010 No alias ferric reductase-like transmembrane component family protein 0.02 Gene family
GSVIVT01015025001 No alias 20.1.1 stress.biotic.respiratory burst Riboflavin... 0.03 Gene family
GSVIVT01019429001 No alias 20.1.1 stress.biotic.respiratory burst Interacts with... 0.02 Gene family
LOC_Os09g26660 Os09g0438000 20.1.1 stress.biotic.respiratory burst Riboflavin... 0.01 Gene family
MA_10435926g0010 No alias 20.1.1 stress.biotic.respiratory burst Interacts with... 0.02 Gene family
Smo101139 PACid_15423120 No description available 0.03 Gene family
Smo110111 PACid_15405026 No description available 0.02 Gene family
Smo266977 PACid_15412235 No description available 0.03 Gene family
Smo81185 PACid_15406035 No description available 0.03 Gene family
Solyc01g099620.3.1 Solyc01g099620.3 20.1.1 stress.biotic.respiratory burst NADPH-oxidase... 0.06 Gene family
Solyc03g117980.3.1 Solyc03g117980.3 20.1.1 stress.biotic.respiratory burst NADPH/respiratory... 0.02 Gene family
Solyc08g081690.3.1 Solyc08g081690.3 20.1.1 stress.biotic.respiratory burst Interacts with... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013112 FAD-bd_8 600 718
IPR013623 NADPH_Ox 141 236
IPR013130 Fe3_Rdtase_TM_dom 398 554
IPR013121 Fe_red_NAD-bd_6 725 884
IPR002048 EF_hand_dom 238 263
No external refs found!