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  5. AMTR_s00066p00101500

AMTR_s00066p00101500 (ATRAP, RAP,...)


Aliases : ATRAP, RAP, evm_27.TU.AmTr_v1.0_scaffold00066.83

Description : RAP domain-containing protein, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0002819 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002819_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00066p00101500

Target Alias Description ECC score Gene Family Method Actions
AT2G31890 ATRAP, RAP RAP 0.03 OrthoFinder output from all 47 species
Adi_g008836 ATRAP, RAP 16S-rRNA maturation factor *(RAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02427 ATRAP, RAP 16S-rRNA maturation factor *(RAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08359 ATRAP, RAP 16S-rRNA maturation factor *(RAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G056200.1 ATRAP, RAP,... 16S-rRNA maturation factor *(RAP) & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000808.34 ATRAP, RAP No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01038263001 ATRAP, RAP RAP domain-containing protein, chloroplastic... 0.06 OrthoFinder output from all 47 species
Gb_29061 ATRAP, RAP RAP domain-containing protein, chloroplastic... 0.03 OrthoFinder output from all 47 species
MA_8868156g0010 ATRAP, RAP RAP domain-containing protein, chloroplastic... 0.03 OrthoFinder output from all 47 species
Nbi_g17991 ATRAP, RAP 16S-rRNA maturation factor *(RAP) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g16092 ATRAP, RAP 16S-rRNA maturation factor *(RAP) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g24589 ATRAP, RAP 16S-rRNA maturation factor *(RAP) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17081 ATRAP, RAP 16S-rRNA maturation factor *(RAP) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008762 ATRAP, RAP 16S-rRNA maturation factor *(RAP) & original... 0.04 OrthoFinder output from all 47 species
Sam_g52565 No alias 16S-rRNA maturation factor *(RAP) & original description: none 0.03 OrthoFinder output from all 47 species
Smo412574 ATRAP, RAP RAP domain-containing protein, chloroplastic... 0.02 OrthoFinder output from all 47 species
Smo412578 No alias No description available 0.05 OrthoFinder output from all 47 species
Smo413123 ATRAP, RAP RAP domain-containing protein, chloroplastic OS=Oryza... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
InterPro domains Description Start Stop
IPR013584 RAP 550 607
No external refs found!