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  5. AMTR_s00066p00019590

AMTR_s00066p00019590 (PFD6,...)


Aliases : PFD6, evm_27.TU.AmTr_v1.0_scaffold00066.2

Description : Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD6 component


Gene families : OG0005135 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005135_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00066p00019590
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AT1G29990 PFD6 prefoldin 6 0.03 OrthoFinder output from all 47 species
Cre12.g502750 PFD6 Cytoskeleton.actin and tubulin folding.Prefoldin... 0.02 OrthoFinder output from all 47 species
Gb_08729 PFD6 component PFD6 of Prefoldin co-chaperone complex 0.03 OrthoFinder output from all 47 species
Sam_g12344 No alias component *(PFD6) of Prefoldin co-chaperone complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEA Interproscan
CC GO:0016272 prefoldin complex IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0019204 obsolete nucleotide phosphatase activity IEP HCCA
CC GO:0030915 Smc5-Smc6 complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0106068 SUMO ligase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002777 PFD_beta-like 15 110
No external refs found!