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  5. AMTR_s00065p00168440

AMTR_s00065p00168440 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00065.134

Description : F-box protein At3g12350 OS=Arabidopsis thaliana


Gene families : OG0008299 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008299_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00065p00168440
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Aev_g02317 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species
Len_g10306 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020748 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008440 inositol-1,4,5-trisphosphate 3-kinase activity IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0051766 inositol trisphosphate kinase activity IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 24 60
No external refs found!