1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00065p00144450

AMTR_s00065p00144450 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00065.98

Description : Cell wall.hemicellulose.heteromannan.synthesis.galactoglucomannan galactosyltransferase (MUCI10)


Gene families : OG0000187 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000187_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00065p00144450

Target Alias Description ECC score Gene Family Method Actions
Aev_g06980 XXT5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g22838 XXT2, XT2, ATXT2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05850 XXT2, XT2, ATXT2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G095000.1 XXT5, Ceric.12G095000 1,6-alpha-xylosyltransferase *(XXT) & original... 0.03 OrthoFinder output from all 47 species
Gb_35517 XXT2, XT2, ATXT2 UDP-xylose-dependent 1,6-alpha-xylosyltransferase 0.04 OrthoFinder output from all 47 species
Gb_39464 XXT2, XT2, ATXT2 UDP-xylose-dependent 1,6-alpha-xylosyltransferase 0.02 OrthoFinder output from all 47 species
Lfl_g05588 XXT5 1,6-alpha-xylosyltransferase *(XXT) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14226 XXT2, XT2, ATXT2 1,6-alpha-xylosyltransferase *(XXT) & original description: none 0.02 OrthoFinder output from all 47 species
Mp2g00460.1 XXT5 UDP-xylose-dependent 1,6-alpha-xylosyltransferase 0.02 OrthoFinder output from all 47 species
Mp3g03490.1 XXT5 UDP-xylose-dependent 1,6-alpha-xylosyltransferase 0.02 OrthoFinder output from all 47 species
Mp3g03520.1 XXT2, XT2, ATXT2 UDP-xylose-dependent 1,6-alpha-xylosyltransferase 0.02 OrthoFinder output from all 47 species
Nbi_g02223 No alias galactoglucomannan galactosyltransferase *(MUCI10) &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004477 XXT5 1,6-alpha-xylosyltransferase *(XXT) & original... 0.03 OrthoFinder output from all 47 species
Sam_g06449 No alias 1,6-alpha-xylosyltransferase *(XXT) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016758 hexosyltransferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR008630 Glyco_trans_34 152 424
No external refs found!