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Aliases : evm_27.TU.AmTr_v1.0_scaffold00065.72
Description : Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana
Gene families : OG0002960 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002960_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G25320 | No alias | TRAF-like family protein | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g029341 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g05545 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g35642 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g22455 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.02G028800.1 | Ceric.02G028800 | not classified & original description: pacid=50585664... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.07G070900.1 | Ceric.07G070900 | not classified & original description: pacid=50626059... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g12067 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01035878001 | No alias | Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
| Len_g54194 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05749 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g12534 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10434824g0010 | No alias | Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Mp8g09710.1 | No alias | MATH domain and coiled-coil domain-containing protein... | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g24466 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g29897 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g22486 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g24114 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g29810 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g15178 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g11589 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Smo173767 | No alias | Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e022965_P001 | Zm00001e022965 | Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005643 | nuclear pore | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| MF | GO:0008565 | obsolete protein transporter activity | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| No external refs found! |