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  5. AMTR_s00064p00123160

AMTR_s00064p00123160 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00064.46

Description : RNA processing.RNA modification.tRNA N6-threonylcarbamoylation.KEOPS/EKC complex.BUD32 component


Gene families : OG0002552 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002552_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00064p00123160

Target Alias Description ECC score Gene Family Method Actions
Aev_g02178 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g30175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19843.t1 Aspi01Gene19843 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61308.t2 Aspi01Gene61308 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.17G025700.1 Ceric.17G025700 not classified & original description: pacid=50617314... 0.04 OrthoFinder output from all 47 species
Dac_g06012 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24019 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g29357 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09943 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_15158 No alias component BUD32 of tRNA N6-threonylcarbamoylation... 0.02 OrthoFinder output from all 47 species
LOC_Os05g46340.1 LOC_Os05g46340 component BUD32 of tRNA N6-threonylcarbamoylation... 0.05 OrthoFinder output from all 47 species
Msp_g20375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20228 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR025520 DUF4408 6 36
IPR008480 DUF761_pln 197 233
No external refs found!