AMTR_s00063p00191490 (GLU1, FD-GOGAT, GLS1,...)

Aliases : GLU1, FD-GOGAT, GLS1, GLUS, evm_27.TU.AmTr_v1.0_scaffold00063.73

Description : Nutrient uptake.nitrogen assimilation.ammonium assimilation.glutamate synthase activities.Fd-dependent glutamate synthase

Gene families : OG0000707 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000707_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00063p00191490

Target	Alias	Description	ECC score	Gene Family Method
AT5G04140	GLU1, FD-GOGAT,...	glutamate synthase 1	0.06	OrthoFinder output from all 47 species
Adi_g004444	GLT1	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.02	OrthoFinder output from all 47 species
Adi_g079982	GLT1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g13725	GLU1, FD-GOGAT,...	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.06	OrthoFinder output from all 47 species
Ala_g02713	GLU1, FD-GOGAT,...	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.02	OrthoFinder output from all 47 species
Als_g19941	GLU1, FD-GOGAT,...	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.03	OrthoFinder output from all 47 species
Aob_g06082	GLU1, FD-GOGAT,...	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.03	OrthoFinder output from all 47 species
Aop_g14028	GLU1, FD-GOGAT,...	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.09	OrthoFinder output from all 47 species
Aspi01Gene16184.t1	GLU1, FD-GOGAT,...	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.02	OrthoFinder output from all 47 species
Cba_g13642	GLU1, FD-GOGAT,...	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.06	OrthoFinder output from all 47 species
Cba_g30019	GLU1, FD-GOGAT,...	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.05	OrthoFinder output from all 47 species
Ceric.38G027700.1	GLU1, FD-GOGAT,...	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.1	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001085.6	GLU2	Ferredoxin-dependent glutamate synthase, chloroplastic...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001085.7	GLU1, FD-GOGAT,...	Ferredoxin-dependent glutamate synthase 1,...	0.02	OrthoFinder output from all 47 species
Cre12.g514050	GLU1, FD-GOGAT,...	Nutrient uptake.nitrogen assimilation.ammonium...	0.04	OrthoFinder output from all 47 species
Cre13.g592200	GLT1	Nutrient uptake.nitrogen assimilation.ammonium...	0.02	OrthoFinder output from all 47 species
Dcu_g06527	GLU1, FD-GOGAT,...	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.02	OrthoFinder output from all 47 species
Dde_g10235	GLU1, FD-GOGAT,...	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.03	OrthoFinder output from all 47 species
GSVIVT01033621001	GLU1, FD-GOGAT,...	Nutrient uptake.nitrogen assimilation.ammonium...	0.12	OrthoFinder output from all 47 species
Gb_17851	GLU1, FD-GOGAT,...	Enzyme classification.EC_1 oxidoreductases.EC_1.4...	0.07	OrthoFinder output from all 47 species
LOC_Os07g46460.1	GLU1, FD-GOGAT,...	Fd-dependent glutamate synthase	0.08	OrthoFinder output from all 47 species
Len_g16427	GLU1, FD-GOGAT,...	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.06	OrthoFinder output from all 47 species
MA_10433005g0010	GLU1, FD-GOGAT,...	Ferredoxin-dependent glutamate synthase, chloroplastic...	0.02	OrthoFinder output from all 47 species
MA_185611g0010	GLU1, FD-GOGAT,...	Enzyme classification.EC_1 oxidoreductases.EC_1.4...	0.04	OrthoFinder output from all 47 species
Mp1g25420.1	GLT1	NADH-dependent glutamate synthase	0.02	OrthoFinder output from all 47 species
Mp2g10580.1	GLU1, FD-GOGAT,...	Fd-dependent glutamate synthase	0.06	OrthoFinder output from all 47 species
Msp_g13340	GLU1, FD-GOGAT,...	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.02	OrthoFinder output from all 47 species
Nbi_g08490	GLU1, FD-GOGAT,...	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.13	OrthoFinder output from all 47 species
Ore_g28872	GLU1, FD-GOGAT,...	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.07	OrthoFinder output from all 47 species
Pir_g11419	GLU1, FD-GOGAT,...	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.07	OrthoFinder output from all 47 species
Pnu_g09414	GLU1, FD-GOGAT,...	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.06	OrthoFinder output from all 47 species
Pp3c14_5770V3.1	GLT1, Pp3c14_5770	NADH-dependent glutamate synthase 1	0.02	OrthoFinder output from all 47 species
Ppi_g11403	GLU1, FD-GOGAT,...	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.04	OrthoFinder output from all 47 species
Sam_g08968	No alias	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.04	OrthoFinder output from all 47 species
Sam_g39577	No alias	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Smo155359	GLU1, FD-GOGAT,...	Nutrient uptake.nitrogen assimilation.ammonium...	0.07	OrthoFinder output from all 47 species
Solyc03g063560.3.1	GLU1, FD-GOGAT,...	Fd-dependent glutamate synthase	0.1	OrthoFinder output from all 47 species
Spa_g03837	GLU1, FD-GOGAT,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g06985	GLU1, FD-GOGAT,...	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.08	OrthoFinder output from all 47 species
Spa_g06986	GLU1, FD-GOGAT,...	not classified & original description: none	0.11	OrthoFinder output from all 47 species
Spa_g15159	GLU1, FD-GOGAT,...	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g53952	GLU1, FD-GOGAT,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g13679	GLU1, FD-GOGAT,...	EC_1.4 oxidoreductase acTing on CH-NH2 group of donor &...	0.07	OrthoFinder output from all 47 species
Zm00001e035758_P001	GLU1, FD-GOGAT,...	Fd-dependent glutamate synthase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006536	glutamate metabolic process	None	Extended
BP	GO:0006537	glutamate biosynthetic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	IEA	Interproscan
BP	GO:0008652	amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009064	glutamine family amino acid metabolic process	None	Extended
BP	GO:0009084	glutamine family amino acid biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015930	glutamate synthase activity	IEA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016491	oxidoreductase activity	IEA	Interproscan
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043648	dicarboxylic acid metabolic process	None	Extended
BP	GO:0043650	dicarboxylic acid biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0004372	glycine hydroxymethyltransferase activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006352	DNA-templated transcription initiation	IEP	HCCA
BP	GO:0006544	glycine metabolic process	IEP	HCCA
BP	GO:0006563	L-serine metabolic process	IEP	HCCA
BP	GO:0009069	serine family amino acid metabolic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	HCCA
MF	GO:0016987	sigma factor activity	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006982	Glu_synth_centr_N	561	856
IPR002932	Glu_synthdom	914	1298
IPR002489	Glu_synth_asu_C	1379	1571

External Links

No external refs found!

AMTR_s00063p00191490 (GLU1, FD-GOGAT, GLS1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation