AMTR_s00063p00178530 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00063.58

Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter

Gene families : OG0000888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00063p00178530

Target	Alias	Description	ECC score	Gene Family Method
AT1G53270	No alias	ABC-2 type transporter family protein	0.06	OrthoFinder output from all 47 species
AT2G37360	No alias	ABC-2 type transporter family protein	0.03	OrthoFinder output from all 47 species
AT3G53510	No alias	ABC-2 type transporter family protein	0.04	OrthoFinder output from all 47 species
AT3G55090	No alias	ABC-2 type transporter family protein	0.04	OrthoFinder output from all 47 species
AT5G13580	No alias	ABC-2 type transporter family protein	0.03	OrthoFinder output from all 47 species
AT5G19410	No alias	ABC-2 type transporter family protein	0.05	OrthoFinder output from all 47 species
AT5G52860	No alias	ABC-2 type transporter family protein	0.05	OrthoFinder output from all 47 species
Aop_g36964	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene05499.t1	Aspi01Gene05499	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene07578.t1	Aspi01Gene07578	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g03340	No alias	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g06245	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g07276	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g17500	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.14G055400.1	Ceric.14G055400	subfamily ABCG transporter & original description:...	0.06	OrthoFinder output from all 47 species
Dcu_g04073	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g06955	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01014222001	No alias	ABC transporter G family member 10 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01022346001	No alias	ABC transporter G family member 5 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
GSVIVT01032625001	No alias	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
GSVIVT01037274001	No alias	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Gb_20468	No alias	subfamily ABCG transporter	0.05	OrthoFinder output from all 47 species
Gb_24085	No alias	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
LOC_Os01g42900.1	LOC_Os01g42900	subfamily ABCG transporter	0.05	OrthoFinder output from all 47 species
LOC_Os03g17350.1	LOC_Os03g17350	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
LOC_Os06g30730.1	LOC_Os06g30730	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Len_g50392	No alias	ABC-G-type lipid transporter *(STR) & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g26422	No alias	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
MA_103974g0010	No alias	ABC transporter G family member 5 OS=Arabidopsis...	0.06	OrthoFinder output from all 47 species
MA_529254g0010	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Mp3g16700.1	No alias	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Mp5g04860.1	No alias	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Mp5g15770.1	No alias	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Ore_g22707	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g31857	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006110	No alias	subfamily ABCG transporter & original description: CDS=1-2232	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023718	No alias	not classified & original description: CDS=1-2514	0.03	OrthoFinder output from all 47 species
Solyc03g113690.1.1	Solyc03g113690	subfamily ABCG transporter	0.06	OrthoFinder output from all 47 species
Solyc05g054890.4.1	Solyc05g054890	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
Spa_g10980	No alias	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g29782	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e001269_P001	Zm00001e001269	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Zm00001e031556_P001	Zm00001e031556	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Zm00001e036158_P002	Zm00001e036158	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Zm00001e042020_P001	Zm00001e042020	ABC transporter G family member 5 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	HCCA
MF	GO:0000156	phosphorelay response regulator activity	IEP	HCCA
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
MF	GO:0004673	protein histidine kinase activity	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
MF	GO:0060089	molecular transducer activity	IEP	HCCA
MF	GO:0140299	small molecule sensor activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	70	198
IPR013525	ABC_2_trans	337	545

External Links

No external refs found!

AMTR_s00063p00178530 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation