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Aliases : LRP1, evm_27.TU.AmTr_v1.0_scaffold00063.48
Description : RNA biosynthesis.transcriptional activation.SRS transcription factor
Gene families : OG0001235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001235_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G19790 | SRS7 | SHI-related sequence 7 | 0.03 | OrthoFinder output from all 47 species | |
| AT1G75520 | SRS5 | SHI-related sequence 5 | 0.04 | OrthoFinder output from all 47 species | |
| AT3G51060 | SRS1, STY1 | Lateral root primordium (LRP) protein-related | 0.07 | OrthoFinder output from all 47 species | |
| AT5G12330 | LRP1 | Lateral root primordium (LRP) protein-related | 0.06 | OrthoFinder output from all 47 species | |
| AT5G66350 | SHI | Lateral root primordium (LRP) protein-related | 0.08 | OrthoFinder output from all 47 species | |
| Adi_g045239 | SRS7 | SRS-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g045684 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g058361 | SHI | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g058362 | SHI | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g061023 | SHI | SRS-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g069569 | LRP1 | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g077130 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g079599 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g079607 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g085909 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g106034 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g122006 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g16410 | LRP1 | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g17440 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g46734 | SRS7 | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g26536 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene36810.t1 | SHI, Aspi01Gene36810 | SRS-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene65745.t1 | SHI, Aspi01Gene65745 | SRS-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0062.g035174 | SHI | SRS-type transcription factor & original description: CDS=1-1092 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0065.g035783 | SHI | SRS-type transcription factor & original description: CDS=1-2148 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.25G035200.1 | SRS1, STY1,... | SRS-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.32G058400.1 | SRS1, STY1,... | SRS-type transcription factor & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g13440 | SHI | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g16665 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g40676 | SHI | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g30563 | SHI | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g47477 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g02264 | SHI | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g09814 | SHI | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g21838 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01009812001 | SRS5 | RNA biosynthesis.transcriptional activation.SRS... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01024206001 | SHI | RNA biosynthesis.transcriptional activation.SRS... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g72490.1 | LRP1, LOC_Os01g72490 | transcription factor (SRS) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os06g49830.1 | SRS1, STY1,... | transcription factor (SRS) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g43410.1 | SRS1, STY1,... | transcription factor (SRS) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g36160.1 | SRS1, STY1,... | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g32454 | LRP1 | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_2299g0010 | LRP1 | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g01643 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g32314 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g26494 | SHI | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g30942 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g25278 | SHI | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g19370 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g26315 | LRP1 | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g48067 | LRP1 | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g16685 | SHI | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g59296 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0017.g007215 | SHI | SRS-type transcription factor & original description: CDS=1-2160 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0051.g013968 | SHI | SRS-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g062400.3.1 | SRS1, STY1,... | transcription factor (SRS) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc10g054070.1.1 | SRS5, Solyc10g054070 | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e004006_P001 | SHI, Zm00001e004006 | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e010227_P001 | SRS1, STY1,... | transcription factor (SRS) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e013256_P002 | SHI, Zm00001e013256 | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e024681_P001 | SHI, Zm00001e024681 | transcription factor (SRS) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e026854_P001 | SHI, Zm00001e026854 | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e030189_P001 | SHI, Zm00001e030189 | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e031567_P001 | LRP1, Zm00001e031567 | transcription factor (SRS) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e034798_P001 | SRS1, STY1,... | transcription factor (SRS) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | HCCA |
| MF | GO:0000156 | phosphorelay response regulator activity | IEP | HCCA |
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0004013 | adenosylhomocysteinase activity | IEP | HCCA |
| MF | GO:0004673 | protein histidine kinase activity | IEP | HCCA |
| MF | GO:0005215 | transporter activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006730 | one-carbon metabolic process | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006952 | defense response | IEP | HCCA |
| BP | GO:0008037 | cell recognition | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0046508 | hydrolase activity, acting on carbon-sulfur bonds | IEP | HCCA |
| BP | GO:0048544 | recognition of pollen | IEP | HCCA |
| MF | GO:0050662 | obsolete coenzyme binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
| MF | GO:0060089 | molecular transducer activity | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:0140299 | small molecule sensor activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007818 | SHI | 72 | 230 |
| No external refs found! |