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  5. AMTR_s00063p00154030

AMTR_s00063p00154030 (ORG2, BHLH038,...)


Aliases : ORG2, BHLH038, evm_27.TU.AmTr_v1.0_scaffold00063.45

Description : Nutrient uptake.copper uptake.regulation.bHLH-Ib iron/copper homeostasis regulator


Gene families : OG0002401 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002401_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00063p00154030
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00268980 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
AMTR_s00001p00269070 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00001p00269160 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
AT1G10585 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
AT1G62975 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G41240 BHLH100 basic helix-loop-helix protein 100 0.02 OrthoFinder output from all 47 species
AT3G56970 ORG2, BHLH038 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G56980 ORG3, BHLH039 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G25400 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 OrthoFinder output from all 47 species
AT4G25410 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G04150 BHLH101 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G51780 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Ehy_g30730 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020561001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Gb_26737 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os01g01870.1 LOC_Os01g01870 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g72370.1 BHLH100, LOC_Os01g72370 transcription factor (bHLH). iron/copper homeostasis... 0.03 OrthoFinder output from all 47 species
MA_141559g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_14544g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_331265g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_384190g0010 No alias transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species
MA_68586g0010 BHLH101 transcription factor (bHLH). iron/copper homeostasis... 0.03 OrthoFinder output from all 47 species
MA_8008760g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_93509g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_938775g0010 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc02g078130.3.1 Solyc02g078130 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc03g114230.2.1 Solyc03g114230 Transcription factor bHLH162 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc09g074805.1.1 Solyc09g074805 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc10g008247.1.1 Solyc10g008247 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g008260.2.1 Solyc10g008260 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Solyc10g079650.2.1 BHLH100, Solyc10g079650 transcription factor (bHLH). iron/copper homeostasis... 0.04 OrthoFinder output from all 47 species
Solyc10g079660.3.1 ORG2, BHLH038,... transcription factor (bHLH). iron/copper homeostasis... 0.04 OrthoFinder output from all 47 species
Solyc12g010585.1.1 Solyc12g010585 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc12g010595.1.1 Solyc12g010595 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e017129_P001 Zm00001e017129 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e018588_P001 BHLH100, Zm00001e018588 transcription factor (bHLH). iron/copper homeostasis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
MF GO:0047134 protein-disulfide reductase (NAD(P)) activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 63 115
No external refs found!