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  5. AMTR_s00063p00143580

AMTR_s00063p00143580 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00063.37

No description available


Gene families : OG0001705 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001705_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00063p00143580
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Ala_g10511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0065.g036002 No alias not classified & original description: CDS=388-1317 0.07 OrthoFinder output from all 47 species
Ceric.15G049100.1 Ceric.15G049100 not classified & original description: pacid=50640820... 0.02 OrthoFinder output from all 47 species
Dac_g32231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05219 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g39100 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15066 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g079620.2.1 Solyc10g079620 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e035765_P001 Zm00001e035765 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR023214 HAD_sf 85 275
No external refs found!