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  5. AMTR_s00063p00013660

AMTR_s00063p00013660 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00063.1

Description : Probable ADP-ribosylation factor GTPase-activating protein AGD11 OS=Arabidopsis thaliana


Gene families : OG0000461 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000461_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00063p00013660

Target Alias Description ECC score Gene Family Method Actions
AT1G70790 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.02 OrthoFinder output from all 47 species
AT4G05330 AGD13 ARF-GAP domain 13 0.04 OrthoFinder output from all 47 species
Ala_g11444 AGD12, ZAC not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g25813 AGD13 class III ARF-GAP ARF-GTPase-activating protein &... 0.02 OrthoFinder output from all 47 species
Ceric.08G029100.1 AGD12, ZAC,... not classified & original description: pacid=50638946... 0.05 OrthoFinder output from all 47 species
Ceric.17G001200.1 AGD13, Ceric.17G001200 not classified & original description: pacid=50617251... 0.03 OrthoFinder output from all 47 species
Ceric.20G090500.1 Ceric.20G090500 not classified & original description: pacid=50566467... 0.03 OrthoFinder output from all 47 species
LOC_Os07g01770.1 LOC_Os07g01770 CAR abscisic acid receptor recruitment factor 0.03 OrthoFinder output from all 47 species
Sam_g48823 No alias class III ARF-GAP ARF-GTPase-activating protein &... 0.03 OrthoFinder output from all 47 species
Spa_g18511 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e028315_P003 Zm00001e028315 class III ARF-GAP ARF-GTPase-activating protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 199 276
IPR001164 ArfGAP_dom 4 118
No external refs found!