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  5. AMTR_s00062p00189850

AMTR_s00062p00189850 (ARAD1,...)


Aliases : ARAD1, evm_27.TU.AmTr_v1.0_scaffold00062.193

Description : Cell wall.pectin.rhamnogalacturonan I.synthesis.1,5-alpha-arabinosyltransferase


Gene families : OG0000774 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000774_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00062p00189850

Target Alias Description ECC score Gene Family Method Actions
AT3G03650 EDA5 Exostosin family protein 0.03 OrthoFinder output from all 47 species
Adi_g009667 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g054781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05646 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02027 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_104022g0010 No alias Probable arabinosyltransferase ARAD1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp3g05600.1 No alias Probable arabinosyltransferase ARAD2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g14890 EDA5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g09563 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g09245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g116040.2.1 Solyc03g116040 Probable arabinosyltransferase ARAD1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc08g062600.3.1 Solyc08g062600 Probable arabinosyltransferase ARAD1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Tin_g14833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e035279_P001 ARAD1, Zm00001e035279 1,5-alpha-arabinosyltransferase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004263 Exostosin 59 356
No external refs found!