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  5. AMTR_s00062p00183880

AMTR_s00062p00183880 (ZIP5,...)


Aliases : ZIP5, evm_27.TU.AmTr_v1.0_scaffold00062.179

Description : Solute transport.carrier-mediated transport.ZIP family.metal cation transporter (ZIP-type)


Gene families : OG0000472 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000472_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00062p00183880
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00182850 ZIP7,... Solute transport.carrier-mediated transport.ZIP... 0.02 OrthoFinder output from all 47 species
Aev_g07079 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06465 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27419.t1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G081000.1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.14G032100.1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.15G030000.1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g13090 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31389 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01026252001 ZIP10 Solute transport.carrier-mediated transport.ZIP... 0.02 OrthoFinder output from all 47 species
GSVIVT01032785001 ATZIP6, ZIP6 Solute transport.carrier-mediated transport.ZIP... 0.05 OrthoFinder output from all 47 species
LOC_Os06g37010.1 ATZIP4, ZIP4,... metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
LOC_Os07g12890.1 ZIP1, LOC_Os07g12890 metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
Lfl_g17667 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33135 ATIRT1, IRT1 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28648 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g17347 ZIP7 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g18046 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e031284_P002 ATZIP4, ZIP4,... metal cation transporter (ZIP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046873 metal ion transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0008037 cell recognition IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
InterPro domains Description Start Stop
IPR003689 ZIP 19 117
No external refs found!