Zm00001d023741 (GRMZM2G082271)


Aliases : GRMZM2G082271

Description : 29.1.7 protein.aa activation.alanine-tRNA ligase Alanyl-tRNA synthetase (ALATS)


Gene families : OG_01_0001080 (Gene family) Phylogenetic Tree(s): OG0001080_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d023741
Cluster HCCA cluster: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020703.19 No alias 29.1.7 protein.aa activation.alanine-tRNA ligase... 0.02 Gene family
Cre02.g143200 No alias 29.1.7 protein.aa activation.alanine-tRNA ligase... 0.04 Gene family
GSVIVT01012030001 No alias 29.1.7 protein.aa activation.alanine-tRNA ligase... 0.03 Gene family
LOC_Os10g10244 Os10g0182000 29.1.7 protein.aa activation.alanine-tRNA ligase... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
BP GO:0043039 tRNA aminoacylation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003156 DHHA1_dom 413 551
IPR018164 Ala-tRNA-synth_IIc_N 19 194
IPR012947 tRNA_SAD 293 351
No external refs found!