AMTR_s00062p00089750 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00062.59

Description : Probable disease resistance protein At4g27220 OS=Arabidopsis thaliana

Gene families : OG0000196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00062p00089750

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00252340	RPS2,...	Disease resistance protein RPS2 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00062p00106150	evm_27.TU.AmTr_v1...	Disease resistance protein At4g27190 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00078p00183570	evm_27.TU.AmTr_v1...	Probable disease resistance protein At1g61310...	0.03	OrthoFinder output from all 47 species
AT1G51480	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.02	OrthoFinder output from all 47 species
AT1G52660	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.04	OrthoFinder output from all 47 species
AT1G63350	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.02	OrthoFinder output from all 47 species
AT3G15700	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.04	OrthoFinder output from all 47 species
Aspi01Gene55095.t1	Aspi01Gene55095	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene56659.t1	Aspi01Gene56659	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01015167001	RPS2	Disease resistance protein RPS2 OS=Arabidopsis thaliana	0.06	OrthoFinder output from all 47 species
GSVIVT01020273001	No alias	Probable disease resistance protein At5g63020...	0.03	OrthoFinder output from all 47 species
GSVIVT01034250001	No alias	No description available	0.04	OrthoFinder output from all 47 species
Gb_01077	RPS2	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Gb_08717	RPS5	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Gb_12854	RPS2	Disease resistance protein SUMM2 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Gb_12859	No alias	Probable disease resistance protein At4g27220...	0.04	OrthoFinder output from all 47 species
Gb_18202	No alias	Probable disease resistance protein At1g61190...	0.03	OrthoFinder output from all 47 species
Gb_24897	No alias	Probable disease resistance protein At4g27220...	0.04	OrthoFinder output from all 47 species
MA_10274199g0010	RFL1	Disease resistance protein RFL1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_10322161g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_10329611g0010	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
MA_10428204g0010	No alias	Probable disease resistance protein At5g63020...	0.04	OrthoFinder output from all 47 species
MA_10431079g0020	No alias	Disease resistance protein SUMM2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_122523g0010	No alias	Disease resistance protein RFL1 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
MA_125257g0010	No alias	Probable disease resistance protein At4g27220...	0.05	OrthoFinder output from all 47 species
MA_168565g0010	No alias	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
MA_359444g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_44026g0010	RPS5	Disease resistance protein RPS5 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_444220g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_48202g0010	No alias	Probable disease resistance protein At5g63020...	0.07	OrthoFinder output from all 47 species
MA_502346g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_5551624g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_562728g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_733g0010	No alias	Probable disease resistance protein At1g15890...	0.02	OrthoFinder output from all 47 species
MA_8348g0030	RPS5	Probable disease resistance protein At1g61180...	0.04	OrthoFinder output from all 47 species
MA_90078g0010	No alias	Disease resistance protein RPS5 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Mp3g09210.1	No alias	Probable disease resistance protein At4g27220...	0.02	OrthoFinder output from all 47 species
Mp3g09230.1	ADR1-L1	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Pp3c3_1280V3.1	Pp3c3_1280	NB-ARC domain-containing disease resistance protein	0.01	OrthoFinder output from all 47 species
Pp3c3_1460V3.1	Pp3c3_1460	Disease resistance protein (CC-NBS-LRR class) family	0.02	OrthoFinder output from all 47 species
Smo105865	No alias	Probable disease resistance protein At4g33300...	0.02	OrthoFinder output from all 47 species
Smo111732	No alias	Putative disease resistance protein At1g50180...	0.03	OrthoFinder output from all 47 species
Solyc02g037540.3.1	Solyc02g037540	Probable disease resistance protein At4g27220...	0.03	OrthoFinder output from all 47 species
Solyc06g048910.2.1	Solyc06g048910	Disease resistance protein At4g27190 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
Solyc08g013970.3.1	Solyc08g013970	Probable disease resistance protein At4g27220...	0.03	OrthoFinder output from all 47 species
Solyc10g076440.1.1	Solyc10g076440	Disease resistance protein At4g27190 OS=Arabidopsis...	0.07	OrthoFinder output from all 47 species
Solyc11g007790.1.1	Solyc11g007790	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

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Type	GO Term	Name	Evidence	Source
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0005984	disaccharide metabolic process	IEP	HCCA
BP	GO:0005985	sucrose metabolic process	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0043531	ADP binding	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
MF	GO:0046912	acyltransferase activity, acyl groups converted into alkyl on transfer	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR025875	Leu-rich_rpt_4	100	133

External Links

No external refs found!

AMTR_s00062p00089750 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation