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AMTR_s00061p00199750 (ATCSLE1, CSLE1,...)


Aliases : ATCSLE1, CSLE1, evm_27.TU.AmTr_v1.0_scaffold00061.240

Description : Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica


Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00061p00199750
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01006760001 ATCSLE1, CSLE1 Cellulose synthase-like protein E6 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
GSVIVT01030467001 CSLB04, ATCSLB4, ATCSLB04 Cellulose synthase-like protein H1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Gb_37358 MUR10, ATCESA7,... Cellulose synthase A catalytic subunit 9 [UDP-forming]... 0.03 OrthoFinder output from all 47 species
LOC_Os02g49332.1 ATCSLE1, CSLE1,... Cellulose synthase-like protein E2 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_10430953g0010 MUR10, ATCESA7,... Cellulose synthase-like protein H1 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
MA_264460g0010 ATCSLE1, CSLE1 Cellulose synthase-like protein E6 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Solyc08g082660.2.1 ATCSLG3, CSLG3,... Cellulose synthase-like protein G3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0016760 cellulose synthase (UDP-forming) activity IEA Interproscan
BP GO:0030244 cellulose biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005150 Cellulose_synth 28 186
IPR005150 Cellulose_synth 205 526
No external refs found!