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  5. AMTR_s00061p00198380

AMTR_s00061p00198380 (KPHMT1, PANB1,...)


Aliases : KPHMT1, PANB1, evm_27.TU.AmTr_v1.0_scaffold00061.236

Description : Coenzyme metabolism.coenzyme A synthesis.pantothenate synthesis.ketopantoate hydroxymethyltransferase


Gene families : OG0003964 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003964_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00061p00198380
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Lfl_g35751 PANB2 ketopantoate hydroxymethyltransferase *(PanB) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e026087_P002 KPHMT1, PANB1,... ketopantoate hydroxymethyltransferase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEA Interproscan
BP GO:0015940 pantothenate biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008219 cell death IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR003700 Pantoate_hydroxy_MeTrfase 40 261
No external refs found!