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  5. AMTR_s00061p00174460

AMTR_s00061p00174460 (XERICO,...)


Aliases : XERICO, evm_27.TU.AmTr_v1.0_scaffold00061.186

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00061p00174460
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AT1G22500 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G34000 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g04830 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene37206.t1 Aspi01Gene37206 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene45023.t1 Aspi01Gene45023 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene65865.t1 Aspi01Gene65865 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.25G065700.1 Ceric.25G065700 not classified & original description: pacid=50593844... 0.03 OrthoFinder output from all 47 species
Dcu_g03665 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g40181 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g25748 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g30250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_40635 RHA2A RHA2 signal transducer of abscisic acid perception 0.03 OrthoFinder output from all 47 species
LOC_Os01g64620.1 LOC_Os01g64620 RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os09g20980.1 LOC_Os09g20980 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os11g47690.1 LOC_Os11g47690 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g42540.1 LOC_Os12g42540 RING-H2 finger protein ATL70 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g29042 XERICO not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10021g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_211g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_223372g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_895676g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g22108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02997 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17683 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sam_g08896 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Solyc06g063110.3.1 Solyc06g063110 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc08g008080.1.1 BRH1, Solyc08g008080 E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g07577 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Tin_g10727 BRH1 E3 ubiquiTin ligase *(BRH) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g20442 ATL2, TL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014764_P001 Zm00001e014764 RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e019438_P001 Zm00001e019438 RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e032838_P001 Zm00001e032838 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e035560_P001 ATL3, Zm00001e035560 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 85 129
No external refs found!