AMTR_s00061p00136710 (RAB2A, AT-RAB2,...)

Aliases : RAB2A, AT-RAB2, RAB-B1B, ATRAB-B1B, RABB1C, ATRABB1C, ATRAB2A, evm_27.TU.AmTr_v1.0_scaffold00061.115

Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.B-class RAB GTPase

Gene families : OG0001412 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001412_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00061p00136710

Target	Alias	Description	ECC score	Gene Family Method
Azfi_s0022.g016044	RAB2A, AT-RAB2,...	B-class RAB GTPase & original description: CDS=1-465	0.03	OrthoFinder output from all 47 species
Dcu_g02507	RAB2A, AT-RAB2,...	B-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g04594	RAB2A, AT-RAB2,...	B-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g03600	RAB2A, AT-RAB2,...	B-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g06179	RAB2A, AT-RAB2,...	B-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0114.g020920	RAB2A, AT-RAB2,...	B-class RAB GTPase & original description: CDS=1183-1821	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007264	small GTPase mediated signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	8	168

External Links

No external refs found!