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  5. AMTR_s00061p00096800

AMTR_s00061p00096800 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00061.73

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00061p00096800

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00040830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
AMTR_s00131p00063460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
Als_g22007 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene14328.t1 KAN, KAN1,... KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G027500.1 Ceric.11G027500 transcription factor *(CLAUSA) & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01013085001 KAN2 RNA biosynthesis.transcriptional activation.MYB... 0.06 OrthoFinder output from all 47 species
LOC_Os02g14490.1 LOC_Os02g14490 Putative Myb family transcription factor At1g14600... 0.05 OrthoFinder output from all 47 species
MA_293791g0010 No alias Myb family transcription factor PHL7 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp3g04970.1 KAN, KAN1 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
Msp_g09591 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44491 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g05209 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g40003 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pir_g66199 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g13922 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30894 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ppi_g58273 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0069.g016534 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Solyc02g076670.3.1 Solyc02g076670 Putative Myb family transcription factor At1g14600... 0.04 OrthoFinder output from all 47 species
Spa_g05502 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g22306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013626_P001 Zm00001e013626 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e015547_P002 Zm00001e015547 Myb-related protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e030364_P002 Zm00001e030364 G2-like GARP transcription factor 0.05 OrthoFinder output from all 47 species
Zm00001e030689_P002 Zm00001e030689 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e033396_P003 PHR1, AtPHR1,... G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 134 181
IPR001005 SANT/Myb 42 93
No external refs found!