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  5. AMTR_s00061p00094480

AMTR_s00061p00094480 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00061.70

No description available


Gene families : OG0002625 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002625_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00061p00094480
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Aev_g09054 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g18945 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g50122 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo170125 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc01g080270.3.1 Solyc01g080270 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
CC GO:0008290 F-actin capping protein complex IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0030029 actin filament-based process IEP HCCA
BP GO:0030036 actin cytoskeleton organization IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
CC GO:0071203 WASH complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!