AMTR_s00061p00064900 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00061.39

No description available


Gene families : OG0001520 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001520_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00061p00064900

Target Alias Description ECC score Gene Family Method Actions
AT5G56190 No alias Transducin/WD40 repeat-like superfamily protein 0.07 OrthoFinder output from all 47 species
Dac_g09275 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ehy_g06765 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ehy_g09797 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
GSVIVT01031657001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_29305 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g48964.1 LOC_Os02g48964 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g07540.1 LOC_Os06g07540 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g31560.1 LOC_Os08g31560 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g03027 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
MA_28828g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g01993 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pir_g30614 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Pnu_g05816 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pp3c10_22842V3.1 Pp3c10_22842 Transducin/WD40 repeat-like superfamily protein 0.02 OrthoFinder output from all 47 species
Sam_g18139 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Zm00001e031051_P005 Zm00001e031051 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e036380_P002 Zm00001e036380 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 313 345
No external refs found!