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  5. AMTR_s00061p00061380

AMTR_s00061p00061380 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00061.36

Description : Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana


Gene families : OG0150333 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00061p00061380
Cluster HCCA: Cluster_90


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003913 DNA photolyase activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
MF GO:0004852 uroporphyrinogen-III synthase activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 221 247
IPR002885 Pentatricopeptide_repeat 396 420
IPR002885 Pentatricopeptide_repeat 119 145
IPR002885 Pentatricopeptide_repeat 255 285
IPR002885 Pentatricopeptide_repeat 291 319
IPR002885 Pentatricopeptide_repeat 90 111
IPR002885 Pentatricopeptide_repeat 192 217
IPR002885 Pentatricopeptide_repeat 427 472
IPR002885 Pentatricopeptide_repeat 322 370
No external refs found!