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  5. AMTR_s00061p00037320

AMTR_s00061p00037320 (EDE1, QWRF5,...)


Aliases : EDE1, QWRF5, evm_27.TU.AmTr_v1.0_scaffold00061.15

Description : Cytoskeleton.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin ring complex (gamma-TuRC).Augmin gamma-TuRC recruiting complex.EDE1 accessory component


Gene families : OG0000808 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000808_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00061p00037320
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AT2G24070 QWRF4 Family of unknown function (DUF566) 0.02 OrthoFinder output from all 47 species
Adi_g014772 SCO3, QWRF1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20911 QWRF8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47588 QWRF2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19947 QWRF4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g50787 QWRF2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54708.t1 QWRF8, Aspi01Gene54708 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0250.g060195 QWRF8 not classified & original description: CDS=8-2572 0.07 OrthoFinder output from all 47 species
Cba_g15429 QWRF8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G068400.1 QWRF8, Ceric.05G068400 not classified & original description: pacid=50577745... 0.09 OrthoFinder output from all 47 species
Cre02.g101750 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g01735 QWRF2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10890 SCO3, QWRF1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01009361001 QWRF2 QWRF motif-containing protein 2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01037854001 QWRF2 Protein SNOWY COTYLEDON 3 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Gb_12261 QWRF4 QWRF motif-containing protein 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_12273 QWRF8 AUGMIN subunit 8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g10820.1 QWRF2, LOC_Os03g10820 QWRF motif-containing protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g34320.1 QWRF8, LOC_Os08g34320 AUGMIN subunit 8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os09g11440.2 QWRF8, LOC_Os09g11440 Protein ENDOSPERM DEFECTIVE 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g02405 QWRF4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g36936 QWRF8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_866921g0010 QWRF2 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g21233 QWRF2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23431 QWRF8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g19963 QWRF2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g096840.3.1 EDE1, QWRF5,... accessory component EDE1 of Augmin gamma-TuRC recruiting complex 0.1 OrthoFinder output from all 47 species
Spa_g40845 QWRF8 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g50145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50146 QWRF2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g20320 SCO3, QWRF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29553 QWRF8 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Zm00001e016106_P002 QWRF8, Zm00001e016106 AUGMIN subunit 8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e018954_P001 QWRF4, Zm00001e018954 Protein ENDOSPERM DEFECTIVE 1 OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006184 obsolete GTP catabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007573 QWRF 373 613
No external refs found!