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  5. AMTR_s00060p00213310

AMTR_s00060p00213310 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00060.160

No description available


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00060p00213310
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
Adi_g066110 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G032000.1 Ceric.08G032000 not classified & original description: pacid=50637512... 0.03 OrthoFinder output from all 47 species
Gb_31867 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 OrthoFinder output from all 47 species
Gb_36932 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Solyc11g011350.3.1 Solyc11g011350 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0004372 glycine hydroxymethyltransferase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!